Publications

Papers

• Aseyev N.A., Borodinova A.A., Pavlova S.A., Roshchina M.A., Roshchin M.V., Nikitin E.S., Balaban P.M. CADENCE - Neuroinformatics Tool for Supervised Calcium Events Detection. Neuroinformatics. 2024. DOI: 10.1007/s12021-024-09677-3
• Biryukova L.M., Tsvetayeva D.A., Midzyanovskaya I.S., Raevsky V.V., Sitnikova E.Y. The neuronal density in the rostral pole of substantia nigra pars compacta in Wistar Albino rats from Rijswijk rats: A link to spike-wave seizures. Journal of Biological Methods. 2024. V. 11. N. 3. e99010022. DOI: 10.14440/jbm.2024.0027
• Cheremushkin E.A., Petrenko N.E., Kuznetsova Y.A., Arseniev G.N., Taranov A.O., Puchkova A.N., Dorokhov V.B. Neural correlates of the efficiency of psychomotor activity recovery following short sleep episodes. European Physical Journal: Special Topics. 2024. V. 233. N. 3. P. 601-606. DOI: 10.1140/epjs/s11734-023-01062-6
• Dorokhov V.B., Puchkova A.N., Shumov D.E., Gandina E.O., Taranov A.O., Ligun N.V., Sveshnikov D.S., Yakunina E.B., Mankaeva O.V., Putilov A.A. The yin and yang of two opponent processes of sleep-wake regulation: Sex-associated differences in the spectral EEG markers of the drives for sleep and wake. Chronobiology International. 2024. V. 41. N. 7. P. 1046-1057. DOI: 10.1080/07420528.2024.2378007
• Dorokhov V.B., Tkachenko O.N., Taranov A.O., Gandina E.O., Ligun N.V. Episodic memory causes a slow oscillation of EEG, awakening and performance recovery from sleep episodes during monotonous psychomotor test. European Physical Journal Special Topics. 2024. V. 233. N. 3. P. 589-599. DOI: 10.1140/epjs/s11734-023-01075-1
• Fateeva V.V., Kushnir A.B., Grechko A.V., Mayorova L.A. Rehabilitation of Patients with Post-Stroke Cognitive Impairments Using a P300-Based Brain–Computer Interface: Results of a Randomized Controlled Trial. Neuroscience and Behavioral Physiology. 2024. V. 54. N. 4. P. 575-580. DOI: 10.1007/s11055-024-01630-w
• Garakh Zh., Larionova E., Shmukler A., Horacek J., Zaytseva Yu. EEG alpha reactivity on eyes opening discriminates patients with schizophrenia and schizoaffective disorder. Clinical Neurophysiology. 2024. N. 161. P. 211-221. DOI: 10.1016/j.clinph.2024.03.003
• Gerasimenko N.Y., Kushnir A.B., Mikhailova E.S. Basic and Superordinate Image Categorization. Influences of the Extent of Congruence and the Time Parameters of Presentation of the Preceding Stimulus. Neuroscience and Behavioral Physiology. 2024. V. 54. N. 1. P. 80-90. DOI: 10.1007/s11055-024-01570-5
• Iotchev I.B., Perevozniuk D.A., Lazarenko I., Perescis M.F.J., Sitnikova E.Y., van Luijtelaar G. The "Twin Peaks" method of automated Spike-Wave detection: A two-step, two-criteria Matlab application. Journal Of Neuroscience Methods. 2024. V. 409. P. 110199. DOI: 10.1016/j.jneumeth.2024.110199
• Isaev M.R., Mokienko O.A., Lyukmanov R.K., Ikonnikova E.S., Cherkasova A.N., Suponeva N.A., Piradov M.A., Bobrov P.D. A multiple session dataset of NIRS recordings from stroke patients controlling brain-computer interface. Scientific Data. 2024. V. 11. N. 1. P. 1168. DOI: 10.1038/s41597-024-04012-6
• Karimova E.D. Live vs video interaction: Sensorimotor and visual cortical oscillations during action observation. Cerebral Cortex. 2024. V. 34. N. 4. bhae168. DOI: 10.1093/cercor/bhae168
• Karimova E.D., Burkitbaev S.E., Zinchuk M., Guekht A. Functional features of the mirror neuron system during action observation and execution in patients with anxiety and depressive symptoms. Advanced Neurology. 2024. V. 3. N. 1. DOI: 10.36922/an.2009
• Kharlamov A.A., Pilgun M. Data Analytics for Predicting Situational Developments in Smart Cities: Assessing User Perceptions. Sensors (Basel, Switzerland). 2024. V. 24. N. 15. P. 4810. DOI: 10.3390/s24154810
• Khorev V., Portnova G.V., Kushnir A.B., Mayorova L.A. Fmri study of changes in large-scale brain networks during affective touch. European Physical Journal: Special Topics. 2024. DOI: 10.1140/epjs/s11734-024-01330-z
• Larionova E., Garakh Z. Spelling principles matter: An ERP study investigating the processing of different types of pseudohomophones. Brain Research. 2024. V. 1839. P. 149012. DOI: 10.1016/j.brainres.2024.149012
• Larionova E., Rebreikina A., Martynova O. Electrophysiological signatures of spelling sensitivity development from primary school age to adulthood. Scientific Reports. 2024. V. 14. N. 1. P. 7585. DOI: 10.1038/s41598-024-58219-z
• Li Y., Sun C., Romanova D., Wu D.O., Fang R., Moroz L.L. Analysis and Visualization of Single-Cell Sequencing Data with Scanpy and MetaCell: A Tutorial. Methods in Molecular Biology. 2024. V. 2757. P. 383-445. DOI: 10.1007/978-1-0716-3642-8_17
• Luponosov Y.N., Solodukhin A.N., Aseyev N.A., Rokitskaya T.I., Kolotova D.Y., Kotova E.A., Kurkin T.S., Poletavkina L.A., Isaeva Y.A., Antonenko Y.N., Balaban P.M., Ponomarenko S.A. Nanoparticles of Push-Pull Triphenylamine-Based Molecules for Light-Controlled Stimulation of Neuronal Activity. ACS Biomaterials Science & Engineering. 2024. V. 10. N. 2. P. 1139-1152. DOI: 10.1021/acsbiomaterials.3c01562
• Mayorova L.A., Kushnir A.B. Sex-Related Differences in Selective Auditory Attention in Dichotic Listening with Different Levels of Difficulty: fMRI Data. Neuroscience and Behavioral Physiology. 2024. V. 54. N. 1. P. 102-111. DOI: 10.1007/s11055-024-01572-3
• Medvedeva T.M., Smirnova G.R., Pavlova I.V., Vinogradova L.V. Different vulnerability of fast and slow cortical oscillations to suppressive effect of spreading depolarization: state-dependent features potentially relevant to pathogenesis of migraine aura. The Journal Of Headache And Pain. 2024. V. 25. N. 1. P. 8. DOI: 10.1186/s10194-023-01706-x
• Mitiureva D., Sysoeva O.V., Proshina E.A., Portnova G.V., Khairullina G.M., Martynova O.V. Comparative analysis of resting-state EEG functional connectivity in depression and obsessive-compulsive disorder. Psychiatry Research. Neuroimaging. 2024. V. 342. P. 111828. DOI: 10.1016/j.pscychresns.2024.111828
• Nikitin M.A., Romanova D., Moroz L.L. Bioinformatic Prohormone Discovery in Basal Metazoans: Insights from Trichoplax. Methods in Molecular Biology. 2024. V. 2757. P. 531-581. DOI: 10.1007/978-1-0716-3642-8_22
• Oblasov I., Bal N.V., Shvadchenko A.M., Fortygina P., Idzhilova O.S., Balaban P.M., Nikitin E.S. Ca(2+)-permeable AMPA receptor-dependent silencing of neurons by KCa3.1 channels during epileptiform activity. Biochemical And Biophysical Research Communications. 2024. V. 733. P. 150434. DOI: 10.1016/j.bbrc.2024.150434
• Perevozniuk D., Lazarenko I., Semenova N., Sitnikova E.Y. A simple and fast ANN-based method of studying slow-wave sleep microstructure in freely moving rats. Biosystems. 2024. V. 235. P. 105112. DOI: 10.1016/j.biosystems.2023.105112
• Proshina E.A., Deynekina T.S., Martynova O.V. Neurogenetics of Brain Connectivity: Current Approaches to the Study (Review). Sovremennye Tekhnologii V Meditsine. 2024. V. 16. N. 1. P. 66-76. DOI: 10.17691/stm2024.16.1.07
• Proshina E.A., Martynova O.V., Portnova G.V., Khairullina G.M., Sysoeva O.V. Long-range temporal correlations in resting state alpha oscillations in major depressive disorder and obsessive-compulsive disorder. Frontiers In Neuroinformatics. 2024. V. 18. P. 1339590. DOI: 10.3389/fninf.2024.1339590
• Proshina E.A., Mitiureva D., Sysoeva O.V. Distinct brain systems are involved in subjective minute estimation with eyes open or closed: EEG source analysis study. Frontiers In Neuroscience. 2024. V. 18. P. 1506987. DOI: 10.3389/fnins.2024.1506987
• Putilov A., Sveshnikov D., Yakunina E., Mankaeva O., Puchkova A.N., Shumov D., Gandina E., Taranov A., Ligun N., Donskaya O., Verevkin E., Dorokhov V.B. How to quantify sleepiness during an attempt to sleep?. Physiological Measurement. 2024. V. 45. N. 9. P. 095008. DOI: 10.1088/1361-6579/ad7930
• Reutov V.P., Pasikova N.V., Sorokina E.G., Davydova L.A. Mechanism of Vesicular Transport – TheMain Transport System in the Cells of Living Organisms. SciBase Neurology. 2024. V. 2. N. 1. P. 1015-1018. DOI: 10.52768/neurology/1015
• Romanova D., Moroz L.L. Parallel evolution of gravity sensing. Frontiers in Cell and Developmental Biology. 2024. V. 12. DOI: 10.3389/fcell.2024.1346032
• Romanova D., Moroz L.L. Brief History of Placozoa. Methods in Molecular Biology. 2024. V. 2757. P. 103-122. DOI: 10.1007/978-1-0716-3642-8_3
• Romanova D., Varoqueaux F., Eitel M., Yoshida M.A., Nikitin M.A., Moroz L.L. Long-Term Culturing of Placozoans (Trichoplax and Hoilungia). Methods in Molecular Biology. 2024. V. 2757. P. 509-529. DOI: 10.1007/978-1-0716-3642-8_21
• Shumikhina S.I., Kozhukhov S.A., Bondar I.V. Dose-dependent changes in orientation amplitude maps in the cat visual cortex after propofol bolus injections. IBRO Neuroscience Reports. 2024. V. 16. P. 224-240. DOI: 10.1016/j.ibneur.2023.12.010
• Sitnikova E.Y. Behavioral and Cognitive Comorbidities in Genetic Rat Models of Absence Epilepsy (Focusing on GAERS and WAG/Rij Rats). Biomedicines. 2024. V. 12. N. 1. P. 122. DOI: 10.3390/biomedicines12010122
• Sitnikova E.Y., Onat F., van Luijtelaar G. Editorial: Epileptic seizure disorders in animal models: advances in translational approaches. Front. Neurol.. 2024. V. 15. P. 1414940. DOI: 10.3389/fneur.2024.1414940
• Sitnikova E.Y., van Luijtelaar G., Onat F. Epileptic seizure disorders in animal models: Advances in translational approaches. doi: 10.3389/978-2-8325-4854-7. Lausanne: Frontiers Media SA. 2024. 109 p.
• Tkachenko O.N., Dorokhov V.B., Dementienko V.V., Gandina E.O., Arseniev G.N., Taranov A.O., Puchkova A.N., Bakaeva Z.V., Sveshnikov D.S. Assessment and prevention of inattention and sleepiness during monotonous operator activity with underlying sleep deprivation. European Physical Journal: Special Topics. 2024. V. 233. N. 3. P. 647-658. DOI: 10.1140/epjs/s11734-024-01088-4
• Verkhlyutov V.M. Recognition of Oral Speech from MEG Data Using Covariance Filters. Neuroscience and Behavioral Physiology. 2024. V. 54. N. 3. P. 458-464. DOI: 10.1007/s11055-024-01612-y
• Verkhlyutov V.M. Speech Recognition from MEG Data Using Covariance Filters. Studies in Computational Intelligence. 2024. V. 1130 LNCS. P. 904-911. DOI: 10.1007/978-3-031-50381-8_98
• Vvedensky V., Verkhlyutov V., Gurtovoy K. One-Stage and Two-Stage Word Recognition Processes, Revealed by Multichannel MEG Measurements. Studies in Computational Intelligence, - 2024 (Neuroinformatics-2024).. 2024. DOI: 10.5281/zenodo.14242937
• Vvedensky V., Verkhlyutov V., Gurtovoy K. Spontaneous synchronization of oscillations between multiple cortical sites and exact fit of the wave crest with the onset of word recognition, significantly accelerate performing of a cognitive task. Studies in Computational Intelligence 2024 ( BICA*AI24). 2024. DOI: 10.5281/zenodo.14234496
• Vvedensky V., Verkhlyutov V.M., Gurtovoy K. Extended and Distant Cortical Areas Coordinate Their Oscillations Approaching the Instant of Decision Making During Recognition of Words. Studies in Computational Intelligence. 2024. V. 1130 LNCS. P. 956-961. DOI: 10.1007/978-3-031-50381-8_103
• Yakovenko I.A., Petrenko N.E., Tkachenko O.N., Gandina E.O., Puchkova A.N., Dorokhov V.B. Interhemispheric asymmetry of the EEG rhythms coupling accompanies cognitive awakening during bimanual performance of a psychomotor test. European Physical Journal: Special Topics. 2024. V. 233. N. 3. P. 607-614. DOI: 10.1140/epjs/s11734-023-01060-8
• Boldyreva G.N., Kuleva A.Yu., Sharova E.V., Masherov E.L., Galkin M.V., Krotkova O.A. Search for Functional Markers of the Hippocampus Including in the Pathological Process. Human Physiology. 2023. V. 49. N. 2. P. 5-17. DOI: 10.31857/S0131164622700217
• Verkhlyutov V.M., Burlakov E.O., Gurtovoy K.G., Vvedensky V.L. Recognition of oral speech according to MEG data by covariance filters. Zh Vyssh Nerv Deiat I P Pavlova. 2023. V. 73. N. 6. P. 800-808. DOI: 10.31857/S0044467723060126
• Gabova A.V., Sarkisova K.Y. Maternal MethylEnriched Diet Normalizes Characteristics of the Sleep–Wake Cycle and Sleep Spindles in Adult Offspring of WAG/Rij Rats with Genetic Absence Epilepsy. Journal of Evolutionary Biochemistry and Physiology. 2023. V. 109. N. 1. P. 75-93. DOI: 10.31857/S086981392301003X
• Garakh Zh.V., Golimbet V.E., Larionova E.V., Lezheiko T.V., Strelets V.B., Zaytseva Yu.S. Association of the rs1344706 Polymorphism of the ZNF804A Gene with Induced EEG Rhythm Changes during Visual Perception of Verbal Stimuli in Healthy and Schizophrenic Subjects. Zhurnal Vysshei Nervnoi Deyatelnosti Imeni I.P. Pavlova. 2023. V. 73. N. 1. 38–51. DOI: 10.31857/S0044467723010070
• Gerasimenko N.Y., Kushnir A.B., Mikhailova E.S. Basic and superordinate image categorization. Influence of the congruence degree and temporal parameters of previous stimulus presentation. Zhurnal vysshei nervnoi deiatelnosti. 2023. V. 73. N. 5. P. 606-621. DOI: 10.31857/S0044467723050040
• Kantserova A.O., Oknina L.B., Pitskhelauri D.I., Podlepich V.V., Bykanov A.E. Clarifying the role of the midbrain in identification of changes in the acoustic environment. Pathogenesis. 2023. V. 21. N. 1. P. 37-45. DOI: 10.25557/2310-0435.2023.01.37-45
• Karimova E.D., Smolskaya V.D., Naratkina A.A. Activity of the mirror system of the brain in people with depressive symptom complex. Journal of Higher Nervous Activity named after. I.P. Pavlova. 2023. V. 73. N. 2. P. 230-241. DOI: 10.31857/S0044467723020053