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Alexey Y. Malyshev

Prof. of RAS, D.Sc. in Biology, Leading Scientist

Laboratory of Cellular Neurobiology of Learning

Publication list

  1. Simonova N.A., Volgushev M.A., Malyshev A.Y. Enhanced Non-Associative Long-Term Potentiation in Immature Granule Cells in the Dentate Gyrus of Adult Rats. Frontiers In Synaptic Neuroscience. 2022. V. 14. P. 889947. DOI: 10.3389/fnsyn.2022.889947.
  2. Chasse R., Malyshev A.Y., Fitch R.H., Volgushev M.A. Altered Heterosynaptic Plasticity Impairs Visual Discrimination Learning in Adenosine A1 Receptor Knock-Out Mice. The Journal Of Neuroscience. 2021. V. 41. N. 21. P. 4631-4640. DOI: 10.1523/JNEUROSCI.3073-20.2021.
  3. Idzhilova O.S., Roshchin M.V., Smirnova G.R., Malyshev A.Y. Central Targeting of Channelrhodopsin2 by the Motif of Potassium Channel Kv2.1 Can be Altered Due to Overexpression of the Construct. BioNanoScience. 2021. V. 11. N. 2. P. 408-416. DOI: 10.1007/s12668-021-00863-0.
  4. Malyshev A.Y., Ostrovsky M.A. Experience in the Use of Optogenetic Approaches to Studies of Brain Functions and Prosthetization of Degenerative Retinas. Neuroscience and Behavioral Physiology. 2020. V. 50. N. 8. P. 1065-1071. DOI: 10.1007/s11055-020-01006-w.
  5. Romanova D.Y., Smirnov K.S., Nikitin E.S., Kohn A.B., Borman A.I., Malyshev A.Y., Balaban P.M., Moroz L.L. Sodium action potentials in placozoa: Insights into behavioral integration and evolution of nerveless animals. Biochemical And Biophysical Research Communications. 2020. V. 532. N. 1. P. 120-126. DOI: 10.1016/j.bbrc.2020.08.020.
  6. Malyshev A.Y., Balaban P.M. More Light on the Brain: 30 Years Later. Neuroscience and Behavioral Physiology. 2019. V. 49. N. 2. P. 159-162. DOI: 10.1007/s11055-019-00728-w.
  7. Smirnova G.R., Roshchin M.V., Vinarskaya A.Kh., Kolotova D.Y., Simonova N.A., Balaban P.M., Malyshev A.Y. Use of Anchoring Motifs to Support the Central and Peripheral Locations of Opsins in Optogenetics. Neuroscience and Behavioral Physiology. 2019. V. 49. N. 9. P. 1089-1091. DOI: 10.1007/s11055-019-00843-8.
  8. Doronin D.A., Barykina N.V., Subach O.M., Sotskov V.P., Plusnin V.V., Ivleva O.A., Isaakova E.A., Varizhuk A.M., Pozmogova G.E., Malyshev A.Y., Piatkevich K.D., Anokhin K.V., Enikolopov G.N., Subach F.V. Genetically encoded calcium indicator with NTnC-like design and enhanced fluorescence contrast and kinetics. BMC Biotechnology. 2018. V. 18. N. 1. P. 10. DOI: 10.1186/s12896-018-0417-2.
  9. Aseyev N.A., Vinarskaya A.K., Roshchin M., Korshunova T.A., Malyshev A.Y., Zuzina A.B., Ierusalimsky V.N., Lemak M.S., Zakharov I.S., Kolosov P.M., Chesnokova E.A., Volkova S., Kasianov A., Uroshlev L., Popova Y., Boyle R.D., Balaban P.M. Adaptive changes in the vestibular system of land snail to a 30-day spaceflight and readaptation on return to earth. Frontiers in Cellular Neuroscience. 2017. V. 11. P. 348. DOI: 10.3389/fncel.2017.00348.
  10. Barykina N.V., Subach O.M., Piatkevich K.D., Jung E.E., Malyshev A.Y., Bogorodskiy A.O., Borshchevskiy V.I., Varizhuk A.M., Pozmogova G.E., Boyden E.S., Anokhin K.V., Enikolopov G.N., Subach F.V. Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. PLoS ONE. 2017. V. 12. N. 8. e0183757. DOI: 10.1371/journal.pone.0183757.
  11. Malyshev A.Y., Roshchin M.V., Smirnova G.R., Dolgikh G.A., Balaban P.M., Ostrovsky M.A. Chloride conducting light activated channel GtACR2 can produce both cessation of firing and generation of action potentials in cortical neurons in response to light. Neuroscience Letter. 2017. V. 640. P. 76-80.
  12. Nikitin E.S., Bal N.V., Malyshev A.Y., Ierusalimsky V.N., Spivak Y.S., Balaban P.M., Volgushev M.A. Encoding of high frequencies improves with maturation of action potential generation in cultured neocortical neurons. Frontiers in Cellular Neuroscience. 2017. V. 11. P. 28. DOI: 10.3389/fncel.2017.00028.
  13. Dolgikh D.A., Malyshev A.Y., Roshchin M.V., Smirnova G.R., Nekrasova O.V., Petrovskaya L.E., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Comparative characteristics of two anion-channel rhodopsins and prospects of their use in optogenetics. Doklady Biochemistry and Biophysics. 2016. V. 471. N. 1. P. 440-442. DOI: 10.1134/S160767291606017X.
  14. Nikitin E.S., Malyshev A.Y., Balaban P.M., Volgushev M.A. Physiological Aspects of the Application of Hodgkin–Huxley Model of Action Potential Initiation for Invertebrate and Vertebrate Neurons. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2016. V. 66. N. 3. P. 279-288. DOI: 10.7868/S0044467716030084.
  15. Nikitin E.S., Malyshev A.Y., Balaban P.M., Volgushev M.A. Physiological aspects of the use of the Hodgkin – Huxley action potential generation model for invertebrate and vertebrate animals. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2016. V. 66. N. 3. P. 279-288.
  16. Bal N.V., Malyshev A.Y., Smirnov I., Balaban P.M. Expression of Channelrhodopsin-2 Using in Suspension Electroporation for Studying the Monosynaptic Transmission in Neuronal Culture. BioNanoScience. 2016. V. 6. N. 4. P. 329-331. DOI: 10.1007/s12668-016-0228-7.
  17. Balaban P.M., Vinarskaya A.K., Zuzina A.B., Ierusalimsky V.N., Malyshev A.Y. Impairment of the serotonergic neurons underlying reinforcement elicits extinction of the repeatedly reactivated context memory. Scientific Reports. 2016. V. 6. P. 36933. DOI: 10.1038/srep36933.
  18. Barykina N.V., Subach O.M., Doronin D.A., Sotskov V.P., Roshchina M.A., Kunitsyna T.A., Malyshev A.Y., Smirnov I.V., Azieva A.M., Sokolov I.S., Piatkevich K.D., Burtsev M.S., Varizhuk A.M., Pozmogova G.E., Anokhin K.V., Subach F.V., Enikolopov G.N. A new design for a green calcium indicator with a smaller size and a reduced number of calcium-binding sites. Scientific Reports. 2016. V. 6. P. 34447. DOI: 10.1038/srep34447.
  19. Dolgikh D.A., Malyshev A.Y., Roshchin M.V., Smirnova G.R., Nekrasova O.V., Petrovskaya L.E., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Comparative characteristics of two anion-channel rhodopsins and prospects of their use in optogenetics. Doklady Biochemistry and Biophysics. 2016. V. 471. N. 1. P. 440-442. DOI: 10.1134/S160767291606017X.
  20. Balaban P.M., Roshchin M., Timoshenko A.K., Zuzina A.B., Lemak M., Ierusalimsky V.N., Aseyev N.A., Malyshev A.Y. Homolog of protein kinase Mζ maintains context aversive memory and underlying long-term facilitation in terrestrial snail Helix. Frontiers in Cellular Neuroscience. 2015. V. 22. N. 9. P. 222. DOI: 10.3389/fncel.2015.00222.
  21. Dolgikh D.A., Malyshev A.Y., Salozhin S.V., Nekrasova O.V., Petrovskaya L.E., Roshchin M.V., Borodinova A.A., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Anion-selective channelrhodopsin expressed in neuronal cell culture and in vivo in murine brain: Light-induced inhibition of generation of action potentials. Doklady Biochemistry and Biophysics. 2015. V. 465. N. 1. P. 424-427. DOI: 10.1134/S160767291506023X.
  22. Malyshev A.Y., Goz R., LoTurco J.J., Volgushev M.A. Advantages and limitations of the use of optogenetic approach in studying fast-scale spike encoding. PLoS ONE. 2015. V. 10. N. 4. e0122286. DOI: 10.1371/journal.pone.0122286.
  23. Ilin V., Malyshev A.Y., Wolf F., Volgushev M.A. Fast computations in cortical ensembles require rapid initiation of action potentials. Journal of Neuroscience. 2013. V. 33. N. 6. P. 2281-2292. DOI: 10.1523/JNEUROSCI.0771-12.2013.
  24. Malyshev A.Y., Tchumatchenko T., Volgushev S., Volgushev M.A. Energy-efficient encoding by shifting spikes in neocortical neurons. European Journal of Neuroscience. 2013. V. 38. N. 8. P. 3181-3188. DOI: 10.1111/ejn.12338.
  25. Malyshev A.Y., Balaban P.M. Changes in intracellular calcium concentration during generation of high-amplitude EPSPs in grape snail neurons. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2012. V. 98. N. 11. P. 1298-1306.
  26. Malyshev A.Y., Balaban P.M. The role of mediator dendro-somatic release in interneuronal communication. Rossijskij Fiziologisheskij Zhurnal im I M Sechenova. 2011. V. 97. N. 10. P. 1084-1091.
  27. Balaban P.M., Malyshev A.Y., Ierusalimsky V.N., Aseyev N.A., Korshunova T.A., Bravarenko N.I., Lemak M.S., Roshchin M., Zakharov I.S., Popova Y., Boyle R. Functional changes in the snail statocyst system elicited by microgravity. PLoS ONE. 2011. V. 6. N. 3. e17710. DOI: 10.1371/journal.pone.0017710.
  28. Hoch T., Volgushev S., Malyshev A.Y., Obermayer K., Volgushev M.A. Modulation of the amplitude of γ-band activity by stimulus phase enhances signal encoding. European Journal of Neuroscience. 2011. V. 33. N. 7. P. 1223-1239. DOI: 10.1111/j.1460-9568.2011.07593.x.
  29. Malyshev A.Y., Balaban P.M. Serotonergic cerebral cells control activity of cilia in the foregut of the pteropod mollusk Clione limacina. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. 2011. V. 197. N. 1. P. 25-32. DOI: 10.1007/s00359-010-0581-x.
  30. Tchumatchenko T., Malyshev A.Y., Wolf F., Volgushev M.A. Ultrafast population encoding by cortical neurons. Journal of Neuroscience. 2011. V. 31. N. 34. P. 12171-12179. DOI: 10.1523/JNEUROSCI.2182-11.2011.
  31. Tchumatchenko T., Malyshev A.Y., Geisel T., Volgushev M.A., Wolf F. Correlations and synchrony in threshold neuron models. Physical Review Letters. 2010. V. 104. N. 5. P. 058102. DOI: 10.1103/PhysRevLett.104.058102.
  32. Malyshev A.Y., Balaban P.M. Buccal neurons activate ciliary beating in the foregut of the pteropod mollusk Clione limacina. Journal of Experimental Biology. 2009. V. 212. N. 18. P. 2969-2976. DOI: 10.1242/jeb.032227.
  33. Malyshev A.Y., Norekian T.P., Balaban P.M. Neural control of heartbeat during two antagonistic behaviors: Whole body withdrawal and escape swimming in the Mollusk Clione limacina. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. 2008. V. 194. N. 10. P. 899-906. DOI: 10.1007/s00359-008-0362-y.
  34. Volgushev M.A., Malyshev A.Y., Balaban P.M., Chistiakova M., Volgushev S., Wolf F. Onset dynamics of action potentials in rat neocortical neurons and identified snail neurons: Quantification of the difference. PLoS ONE. 2008. V. 3. N. 4. e1962. DOI: 10.1371/journal.pone.0001962.
  35. Lemak M.S., Bravarenko N.I., Bobrov P.D., Bezuglov V.V., Ierusalimsky V.N., Storozhuk M.V., Malyshev A.Y., Balaban P.M. Cannabinoid regulation in identified synapse of terrestrial snail. European Journal of Neuroscience. 2007. V. 26. N. 11. P. 3207-3214. DOI: 10.1111/j.1460-9568.2007.05945.x.
  36. Balaban P.M., Malyshev A.Y., Ierusalimsky V.N., Aseev N.A., Korshunova T.A., Bravarenko N.I., Lemak M.S., Roschin M.V., Zakharov I.S., Popova Y., Boyle R. Structure and function of the snail statocyst system after a 16-day flight on FOTON-M-2. Journal of Gravitational Physiology. 2006. V. 13. N. 1. P. 2101-2104.
  37. Ivanova J.L., Leonova O.G., Popenko V.I., Ierusalimsky V.N., Korshunova T.A., Boguslavsky D.V., Malyshev A.Y., Balaban P.M., Belyavsky A.V. Intracellular localization of the HCS2 gene products in identified snail neurons in vivo and in vitro. Cellular and Molecular Neurobiology. 2006. V. 26. N. 2. P. 127-144. DOI: 10.1007/s10571-006-9025-0.
  38. Korshunova T.A., Malyshev A.Y., Zakharov I.S., Ierusalimskii V.N., Balaban P.M. Functions of peptide CNP4, encoded by the HCS2 gene, in the nervous system of Helix lucorum. Neuroscience and Behavioral Physiology. 2006. V. 36. N. 3. P. 253-260. DOI: 10.1007/s11055-006-0007-y.
  39. Norekian T.P., Malyshev A.Y. Neural mechanisms underlying co-activation of functionally antagonistic motoneurons during a Clione feeding behavior. Journal of Neurophysiology. 2006. V. 95. N. 4. P. 2560-2569. DOI: 10.1152/jn.01174.2005.
  40. Korshunova T.A., Malyshev A.Y., Zakharov I.S., Ierusalimsky V.N., Balaban P.M. Functional role of neuropeptide CNP4 encoded by gene HCS2 in Helix lucorum nervous system. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2005. V. 55. N. 1. P. 91-99.
  41. Bravarenko N.I., Malyshev A.Y., Voronin L.L., Balaban P.M. Ephaptic feedback in identified synapses in mollusk neurons. Neuroscience and Behavioral Physiology. 2005. V. 35. N. 8. P. 781-787. DOI: 10.1007/s11055-005-0124-z.
  42. Norekian T.P., Malyshev A.Y. Coordinated excitatory effect of GABAergic interneurons on three feeding motor programs in the mollusk Clione limacina. Journal of Neurophysiology. 2005. V. 93. N. 1. P. 305-315. DOI: 10.1152/jn.00722.2004.
  43. Bravarenko N.I., Malyshev A.Y., Voronin L.L., Balaban P.M. Ephaptic feedback in identified synapses of terrestrial snails. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2004. V. 54. N. 4. P. 562-572.
  44. Balaban P.M., Chistiakova M., Malyshev A.Y., Volgushev M.A. Dependence of Calcium Influx in Neocortical Cells on Temporal Structure of Depolarization, Number of Spikes, and Blockade of NMDA Receptors. Journal of Neuroscience Research. 2004. V. 76. N. 4. P. 481-487. DOI: 10.1002/jnr.20104.
  45. Boguslavsky D., Ierusalimsky V.N., Malyshev A.Y., Balaban P.M., Belyavsky A. Selective blockade of gene expression in a single identified snail neuron. Neuroscience. 2003. V. 119. N. 1. P. 15-18. DOI: 10.1016/S0306-4522(03)00075-7.
  46. Bravarenko N.I., Korshunova T.A., Malyshev A.Y., Balaban P.M. Synaptic contact between mechanosensory neuron and withdrawal interneuron in terrestrial snail is mediated by L-glutamate-like transmitter. Neuroscience Letters. 2003. V. 341. N. 3. P. 237-240. DOI: 10.1016/S0304-3940(03)00213-1.
  47. Norekyan T.P., Nikitin E.S., Bravarenko N.I., Malyshev A.Y., Balaban P.M. Phase-dependent coordination of two motor programs in the buccal ganglion of a pteropod mollusk. Neuroscience and behavioral physiology. 2003. V. 33. N. 2. P. 107-111. DOI: 10.1023/A:1021757411343.
  48. Malyshev A.Y., Balaban P.M. Identification of mechanoafferent neurons in terrestrial snail: response properties and synaptic connections. J. Neurophysiol.. 2002. V. 87. N. 5. P. 2364-2371. DOI: 10.1152/jn.00185.2001.
  49. Malyshev A.Y., Norekian T.P. Phase-locked coordination between two rhythmically active feeding structures in the mollusk Clione limacina. I. Motor neurons. Journal of Neurophysiology. 2002. V. 87. N. 6. P. 2996-3005. DOI: 10.1152/jn.2002.87.6.2996.
  50. Norekian T.P., Nikitin E.S., Bravarenko N.I., Malyshev A.Y., Balaban P.M. Phase-dependent coordination of two motor programs in the buccal ganglion of a pteropod mollusk. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2001. V. 51. N. 6. P. 717-722.
  51. Balaban P.M., Poteryaev D.A., Zakharov I.S., Uvarov P., Malyshev A.Y., Belyavsky A.V. Up- and down-regulation of Helix command-specific 2 (HCS2) gene expression in the nervous system of terrestrial snail Helix lucorum. Neuroscience. 2001. V. 103. N. 2. P. 551-559. DOI: 10.1016/S0306-4522(01)00004-5.
  52. Bravarenko N.I., Ierusalimsky V.N., Korshunova T.A., Malyshev A.Y., Zakharov I.S., Balaban P.M. Participation of GABA in establishing behavioral hierarchiesin the terrestrial snail. Experimental Brain Research. 2001. V. 141. N. 3. P. 340-348. DOI: 10.1007/s002210100886.
  53. Bravarenko N.I., Ierusalimsky V.N., Korshunova T.A., Malyshev A.Y., Zakharov I.S., Balaban P.M. Participation of GABA in establishing behavioral hierarchiesin the terrestrial snail. Experimental Brain Research. 2001. V. 141. N. 3. P. 340-348. DOI: 10.1007/s002210100886.
  54. Malyshev A.Y., Balaban P.M. Synaptic facilitation in Helix neurons depends upon postsynaptic calcium and nitric oxide. Neuroscience Letters. 1999. V. 261. N. 1-2. P. 65-68. DOI: 10.1016/S0304-3940(98)01010-6.
  55. Malyshev A.Y., Norekian T.P., Willows A.O. Differential effects of serotonergic and peptidergic cardioexcitatory neurons on the heart activity in the pteropod mollusc, Clione limacina. Journal of Comparative Physiology - A Sensory, Neural, and Behavioral Physiology. 1999. V. 185. N. 6. P. 551-560. DOI: 10.1007/s003590050415.
  56. Malyshev A.Y., Bravarenko N.I., Pivovarov A.S., Balaban P.M. Effects of serotonin levels on postsynaptically induced potentiation of snail neuron responses. Neuroscience and Behavioral Physiology. 1998. V. 28. N. 5. P. 556-563. DOI: 10.1007/BF02463017.
  57. Malyshev A.Y., Bravarenko N.I., Pivovarov A.S., Balaban P.M. The effect of the serotonin level on the postsynaptically induced potentiation of neuronal responses in the snail. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 1997. V. 47. N. 3. P. 553-562.
  58. Malyshev A.Y., Bravarenko N., Balaban P.M. Dependence of synaptic facilitation postsynaptically induced in snail neurons on season and serotonin level. NeuroReport. 1997. V. 8. N. 5. P. 1179-1182. DOI: 10.1097/00001756-199703240-00024.
 

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